University of Iowa: Institute for Vision Research
Spectacle and cellcuratoR were developed by an interdisciplinary team within the Institute for Vision Research at the University of Iowa. The Institute of Vision Research is deeply dedicated to treating and curing visual diseases. More information can be found at our website ivr.uiowa.edu
Powered by cellcuratoR
cellcuratoR is an R package for sharing interactive single-cell expression data from Seurat. Any single-cell RNA sequencing dataset processed with Seurat (v3) can be converted into objects interpretable by cellcuratoR. Code and documentation are available at github/drewvoigt10/cellcuratoR as well as animated instructions for navigating the user interface.
Spectacle Citation: if you use Spectacle or cellcuratoR for your research, please consider citing the manuscript that describes this platform:
Spectacle: An interactive resource for ocular single-cell RNA sequencing data analysis. Experimental Eye Research, September 2020. PMID: TBD
All Seurat-analyzed datasets (in .RData files) are publically available at https://oculargeneexpression.org/pages/methods_tech.html
If you use data from the following experiments in your research, please consider citing the relevant published works: